dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000004719_4|CGC1
Gene ID: MGYG000004719_00349
Location and strand information: 14954 - 16858 (+)
Family: 3.A.1.210.3
Protein type: TC
Protein description: Lipid A export ATP-binding/permease protein MsbA

Gene clsuter ID: MGYG000004719_4|CGC1
Gene ID: MGYG000004719_00350
Location and strand information: 16839 - 18509 (+)
Family: 3.A.1.135.5
Protein type: TC
Protein description: putative ABC transporter ATP-binding protein

Gene clsuter ID: MGYG000004719_4|CGC1
Gene ID: MGYG000004719_00351
Location and strand information: 18753 - 19685 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000004719_4|CGC1
Gene ID: MGYG000004719_00352
Location and strand information: 19797 - 22562 (+)
Family: GH3
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.6838
Protein molecular weight: 100398.6
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004719_4|CGC1
Gene ID: MGYG000004719_00353
Location and strand information: 23065 - 24084 (+)
Family: LacI
Protein type: TF
Protein description: Catabolite control protein A

Gene clsuter ID: MGYG000004719_4|CGC1
Gene ID: MGYG000004719_00354
Location and strand information: 24219 - 25550 (+)
Family: SBP_bac_1
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004719_4|CGC1
Gene ID: MGYG000004719_00355
Location and strand information: 25618 - 26538 (+)
Family: 3.A.1.1.11
Protein type: TC
Protein description: Lactose transport system permease protein LacF

Gene clsuter ID: MGYG000004719_4|CGC1
Gene ID: MGYG000004719_00356
Location and strand information: 26551 - 27405 (+)
Family: 3.A.1.1.11
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000004719_4|CGC1
Gene ID: MGYG000004719_00357
Location and strand information: 27418 - 29553 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004719_4|CGC1
Gene ID: MGYG000004719_00358
Location and strand information: 29646 - 32000 (+)
Family: GH65
Protein type: CAZyme
Protein description: Kojibiose phosphorylase
Protein isoelectric point: 4.896
Protein molecular weight: 89430.68
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004719_4|CGC1
Gene ID: MGYG000004719_00359
Location and strand information: 32036 - 32737 (+)
Family: null
Protein type: null
Protein description: Beta-phosphoglucomutase

Gene clsuter ID: MGYG000004719_4|CGC1
Gene ID: MGYG000004719_00360
Location and strand information: 32753 - 35020 (+)
Family: GH65
Protein type: CAZyme
Protein description: Alpha,alpha-trehalose phosphorylase
Protein isoelectric point: 4.8842
Protein molecular weight: 86160.64
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004719_4|CGC1
Gene ID: MGYG000004719_00361
Location and strand information: 35391 - 35600 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004719_4|CGC1
Gene ID: MGYG000004719_00362
Location and strand information: 35618 - 36574 (+)
Family: GT2
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.8624
Protein molecular weight: 36207.05
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004719_4|CGC1
Gene ID: MGYG000004719_00363
Location and strand information: 36706 - 38124 (+)
Family: 9.B.18.1.1
Protein type: TC
Protein description: UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase

Gene clsuter ID: MGYG000004719_4|CGC1
Gene ID: MGYG000004719_00364
Location and strand information: 38136 - 39242 (+)
Family: null
Protein type: null
Protein description: Transcriptional regulator LytR

Gene clsuter ID: MGYG000004719_4|CGC1
Gene ID: MGYG000004719_00365
Location and strand information: 39243 - 40211 (+)
Family: GT2
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.5825
Protein molecular weight: 37035.6
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004719_4|CGC1
Gene ID: MGYG000004719_00366
Location and strand information: 40302 - 41765 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004719_4|CGC1
Gene ID: MGYG000004719_00367
Location and strand information: 41904 - 43445 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004719_4|CGC1
Gene ID: MGYG000004719_00368
Location and strand information: 43517 - 44827 (-)
Family: GH13|GH13_20
Protein type: CAZyme
Protein description: Cyclomaltodextrinase
Protein isoelectric point: 5.404
Protein molecular weight: 50140.48
NCBI Blastp with this gene.
Protein sequence: copy AA seq

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is starch download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000004719_00349	Lipid A export ATP-binding/permease protein MsbA	TC	14954	16858	+	3.A.1.210.3
MGYG000004719_00350	putative ABC transporter ATP-binding protein	TC	16839	18509	+	3.A.1.135.5
MGYG000004719_00351	HTH-type transcriptional activator RhaR	TF	18753	19685	-	HTH_AraC+HTH_AraC
MGYG000004719_00352	hypothetical protein	CAZyme	19797	22562	+	GH3
MGYG000004719_00353	Catabolite control protein A	TF	23065	24084	+	LacI
MGYG000004719_00354	hypothetical protein	STP	24219	25550	+	SBP_bac_1
MGYG000004719_00355	Lactose transport system permease protein LacF	TC	25618	26538	+	3.A.1.1.11
MGYG000004719_00356	L-arabinose transport system permease protein AraQ	TC	26551	27405	+	3.A.1.1.11
MGYG000004719_00357	hypothetical protein	null	27418	29553	+	Bac_rhamnosid6H
MGYG000004719_00358	Kojibiose phosphorylase	CAZyme	29646	32000	+	GH65
MGYG000004719_00359	Beta-phosphoglucomutase	null	32036	32737	+	HAD_2
MGYG000004719_00360	Alpha,alpha-trehalose phosphorylase	CAZyme	32753	35020	+	GH65
MGYG000004719_00361	hypothetical protein	null	35391	35600	+	No domain
MGYG000004719_00362	hypothetical protein	CAZyme	35618	36574	+	GT2
MGYG000004719_00363	UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase	TC	36706	38124	+	9.B.18.1.1
MGYG000004719_00364	Transcriptional regulator LytR	null	38136	39242	+	LytR_cpsA_psr
MGYG000004719_00365	hypothetical protein	CAZyme	39243	40211	+	GT2
MGYG000004719_00366	hypothetical protein	null	40302	41765	+	No domain
MGYG000004719_00367	hypothetical protein	null	41904	43445	+	Trypsin_2\| Peptidase_M50\| PDZ_2
MGYG000004719_00368	Cyclomaltodextrinase	CAZyme	43517	44827	-	GH13\| GH13_20
Protein ID	Protein Name	Type	Start	End	Strand	Signature